The discussion forums in the XSEDE User Portal are for users to share experiences, questions, and comments with other users and XSEDE staff. Visitors are welcome to browse and search, but you must login to contribute to the forums. While XSEDE staff monitor the lists, XSEDE does not guarantee that questions will be answered. Please note that the forums are not a replacement for formal support or bug reporting procedures through the XSEDE Help Desk. You must be logged in to post to the user forums.

« Back to Stampede Forum

Error while loading shared libraries.

Combination View Flat View Tree View
Threads [ Previous | Next ]
toggle
Hello,

I'm trying to run a LAMMPS simulation with the following job script:

 1#!/bin/bash
 2
 3#SBATCH -J SiCyl
 4#SBATCH -o outSiCyl_8c1n.txt
 5#SBATCH -p normal
 6#SBATCH -N 1
 7#SBATCH -n 8
 8#SBATCH -t 12:00:00
 9
10
11module load openkim/1.2.2
12module load voro++/0.4.5
13module load lammps
14ibrun /opt/apps/intel13/mvapich2_1_9/lammps/2014_01_10/bin/lmp_stampede < /home1/03036/[username]/8cores_1node_070215/in.SiCyl


However, when I run the job, I get the error
error while loading shared libraries: /admin/build/admin/rpms/stampede/BUILD/openkim-api-v1.2.2/KIM_API/libkim.so: cannot open shared object file: No such file or directory


Could someone please tell me what caused this error and how to fix it? Has the path to the lmp_stampede executable changed?

Thank you.